YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9181923
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHHSSSHLL LLISVVFGAV WVAHAQVPFP GKCPDVKLLD TFDAEAYMGV WYEYAAYPFA  60
   61 FEIGKKCIYA NYSLIDNSTV SVVNAAINRF TGQPSNVTGQ AKVLGPGQLA VAFYPTQPLT 120
  121 KANYLVLGTD YESYAVVYSC TSVTPLANFK IVWILTRQRE PSAEAVDAAR KILEDNDVSQ 180
  181 AFLIDTVQKN CPRLDGNGTG LTGEDGLDVD DFVSTTVPNA IEKA

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	224	0.99