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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|5669167
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEDLEKPLL GPENLREEGI DLENLPLEEV FEQLITSKEG LSAEDAERRL KIFGPNKLEE  60
   61 KRENKFLKFL RFMWNPCSWV MEAAAIMAIG LANGGGQGPD WQDFVGIVCL LLINSTISFI 120
  121 EENNAGNAAA ALMARLAPRT KVLRDGRWQE KDAAILVPGD IISIKLGDII PADARLLEGD 180
  181 PLKVDQSALT GESLPITKKT GDEVFSGSTC KHGEIEAVVI ATGVNSFFGK AAHLVDSTEA 240
  241 SGHFQKVLAS IGNFCICSIA VGMIFEIIIM YAVQRRSYRT GINNLLVLLI GGIPIAMPTV 300
  301 LSVTLAIGSH RLSQQGAITK RMTAIEEMAG MDVLCSDKTG TLTLNRLTVD RNLIEVFQRD 360
  361 MDKDMVVLLA ARASRLENQD AIDAAIINVL ADPKEARANI RQVHFLPFNP VDKRTAITYI 420
  421 DSDGKWYRAS KGAPEQILDL CQEKQQISAK VHTIIDRFAE RGLRSLAVAF QEIPENSKES 480
  481 PGGPWAFCGL LPLFDPPRHD SAETIRRALN LGVCVKMITG DQLAIAKETG RRLGMGTNMY 540
  541 PSFSFFGRDK DENEALPVDE LIEKADGFAG VFPEHKYEIV KILQANGHIV GMTGDGVNDA 600
  601 PALKKADIGI AVADATDAAR SASDLVLTEP GLSVIVSAVL TSRAIFQRMK NYTIYAVSIT 660
  661 IRIVLGFMLL ALIWEYDFPP FMVLIIAILN DGTIMTISKD RVKPSPGPDS WKLNEIFATG 720
  721 IVIGTYLALV SVLFYWLADS TLFFETHFHV KSISGNTEEI SAAIYLQVSI ISQALIFVTR 780
  781 SQSWSFIERP GLLLMFAFVV AQLVATLIAV YAHIEFASIS GIGWGWAGVI WLYSLIFYIP 840
  841 LDIIKFIVRY GLTGDAWNLL FDKKTAFTSK KDYGREDRET KWVLSVRTLQ GVISPEFETK 900
  901 SRRPSMIAEQ AKRRAEITRL RELYTLRGHI ESVARLKNLD FNKIQTAHTV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle