YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13182947
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNNAGYSKD KMRDTEKYPI NTVYDRHEHS IIHSLPAVKR IKLWLRFILK RLIVLLLLIQ  60
   61 AFLTIRVWLD PEGEHIQYIH HFIKHHEPNK SINPSKLYEK MMFNTEMIWP DEYSYKNNLL 120
  121 TVQIGQNKGQ ILQSIDDLKF YDNDPDEIEK IVSKGLERSR SEFHALV

Type	Start	End	Confidence
Cytoplasmic	1	46	0.95
Transmembrane Helix	47	69	0.87
Non-Cytoplasmic	70	167	0.99