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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|10441337
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.66
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLKSLFPSI LAAASFVSSV AAEDLPAIEI VGNKFFYSNN GSQFFIKGIA YQQNNLDSND  60
   61 SFVDPLANPE HCKRDIPYLE AVDTNVIRVY ALDTSQDHTE CMQMLQDAGI YVIADLSQPD 120
  121 ESINRNDPSW DLDLFERYTS VVDLFHNYTN ILGFFAGNEV TNKKSNTDAS AFVKAAIRDT 180
  181 KAYIKSKGYR KIPVGYSAND DSAIRVSLAE YFACGDDDKA ADFFGMNMYE WCGDSSYKAS 240
  241 GYESATTDYK NLGIPIFFSE YGCNEVRPRK FTEVGTIFGD QMTPVWSGGI VYMYFEEENK 300
  301 YGLVSVKDNS VSTLQDYANY KSEIKSISPS SAKASAESAS SISRTSCPTN TNNWEASTDL 360
  361 PPTPDKDVCE CMSASLKCVV DDKVDSDDYA DLFDYICAKI DCSGINANAT KGNYGAYSPC 420
  421 HSKDKLSFVM NLYYEENKES KSACDFGGSA SLQSAKTAGS CSAYLSSAGS SGLGTVSGTV 480
  481 RTDTSQSTSG SGSGSGSGSG SGSGSGSGSS SSSSSSSSSS GSSGKKSAAS IVSVNLLTKI 540
  541 ATIGISIVVG FGLITM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle