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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46394340
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSWAATSAG EMPVAPPSSS SAAVGMVEFP AAAAGLGYAG MTAKEAGGGY QERRVVVGEM  60
   61 DFFKTAEKRG ERKEPPPATA TAAASGHAGA SPDDLSLNKD DLTINMGLLV GRRRNSGSEE 120
  121 SIVDDGGVSS NDEEHREAKA ALAVTKAEIG RLSEENKRLK NMLSNVTTKY NSLQMQFVTL 180
  181 MQQRRSVLAA PIHQQELLDP EKKEQEGSQQ QQQQQLIPRQ FISLGSASLQ PDVEAPHSVV 240
  241 VVGGGGGDVC APSSSNPDAA VPAMMPLPHF DHHNHHHPIH GGRERGSSPA EADHHRHRQQ 300
  301 EQPPPPPQQQ LLPPSWLPAD KVPRFLPGKG PEPIPEAATM RKARVSVRAR SDAPMISDGC 360
  361 QWRKYGQKMA KGNPCPRAYY RCTMAAGCPV RKQVQRCAED RTVLITTYEG NHNHPLPPAA 420
  421 MAMASTTAAA ASMLLSGSMP SADGSLMAGS NFLARAVLPC SSTVATISAS APFPTVTLDL 480
  481 TQTAPPPPPA SSTQPQPPRP EPAQLQAALA EAARPVALPQ LFGQKLYDQS KLSAVQAVAG 540
  541 TKGSDGGALA DTVNAATAAI ASDPNFTAVL AAALTSYIGS SSGSGGGGGG GSSGTVQPLM 600
  601 SGGGDSCSRD DKIGEQNS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle