YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44662989
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSDAVVARS IGVLLGLGIA GFFILRRTLK SSSKKDNGAF IYYFELLPPP PPPPPSAPLP  60
   61 LSGLTFAVKD IFDVEGFITG FGNPVWAETH EPATVTAPAV KVLVEAGAKC VGKLHMDELA 120
  121 YSINGENKHY GTPVNPAAPN RIPGGSSSGS AVAVAANCVD FSLGTDTGGS VRVPAAFCGI 180
  181 LGFRPSHGAI SVSGVLPMAQ SFDTVGWFAK DPKTLRQVGH ALLQLPYSDS KQPRRVLIAD 240
  241 DCFKLSLIPN EDVVGAVIRS VQKLLGRQVL QYINLGDFIR RNVPSLKELE KEISNGSPIG 300
  301 ALTLLRTAMQ LLQRWEFKEN HQEWLENAKP DLSSDIAARV QAALDMKGDQ VSLVQQIRNE 360
  361 ARFAINDLLK NDTILVMPTV PDIPPKLGIK ADFPDEFRAR AFDLLSVSGM SGCCQVSVPV 420
  421 GEYNNVPTAV SLLAKRGSDR FLLDTVLTAY PTIQEEAKGA SDRFSAEAAE MAKEKGNASF 480
  481 KEKDYKKAIS HYTDAIRMDE NNATFYNNRA MAYLQLCSFQ EAEADCTKAL GLDKKSVKAY 540
  541 LRRGTAREFL GYYKEANDDF RQAQILEPTN KTASEALARL KKLLI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle