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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GHR_AILME
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLWQLLLTL AVAGSGNAVS GSEATPAILG RASQSLQRVN PGPGTNPSGK PQFTKCRSPE  60
   61 LETFSCHWTE GVHHGVKNPG SIQLFYIRRS TQEWTPEWKE CPDYVSAGEN SCYFNSSYTS 120
  121 IWIPYCIKLT SNGDTVDQKC FSVEEIVQPD PPIGLNWTLL NISLTGIHAD IQVRWEPPPN 180
  181 ADVQKGWIVL EYELQYKEVN ESQWKMMDPV LSTSVPVYSL RLDKEYEVRV RSRQRNSEKY 240
  241 GEFSEVLYVA LPQMSPFACE EDFQFPWFLI IIFGIFGLTM ILFLFIFSKQ QRIKMLILPP 300
  301 VPVPKIKGID SDLLKEGKLE EVSTILAIHD NYKPEFYNDD SWVEFIELDI DDPDEKTEGS 360
  361 DTDRLLSNDH EKSLNILGAK DDDSGRTSCY EPDILETDFN ASDVCDGTSE VAQPQRLKGE 420
  421 IDLLCLDQKN QSNSPSTDTA PNTQQPGVIL AKENKPRPLL ISGTESTHQA AHPQLSNPSS 480
  481 LANIDFYAQV SDITPAGSVV LSPGQKNKAG IAPCDMPPEV VSLCQANFIM DNAYFCEADA 540
  541 KKCITVAPHV EAESRGEPSF NQEDIYITTE SLTTVAGQPG TAERAPSSEI PVPDYTSIHI 600
  601 VQSPRGLVLN ATALPLPDKE FLSSCGYVST DQLNKIMP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle