YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14161406
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLDTLPMLGN VLLLCFFVFF IFGIIGVQLW EGILRQRCSL MRTEGMVYPL TLSQYYEFSK  60
   61 DQDYICSTPN DSGMHLCGNF PPYRIGSLVC NEEAKLFDFN EPTNTSCVNW NQYYTTCKQS 120
  121 GENPFQGTIS FDNIGMAWVA IFLVISLEGW TDIMYYVQDA H

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.74
Transmembrane Helix	8	32	0.86
Cytoplasmic	33	133	0.77
Transmembrane Helix	134	151	0.72
Non-Cytoplasmic	152	161	0.62