YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9789577, gi\|6...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPANKDGDGG WKSFIWNSDK KEFLGRTGCS WLKIFIFYVI FYGCLAGIFI GTIQAMLLTL  60
   61 SNYKPTYQDR VAPPGLSHSP RPDKAEISYN INDESTYMPY VNHIDAFLKA YNQDIQEDNT 120
  121 KFEDCGDKPE FYTDRGELES DNGVRKACRF RREWLGECSG QKDEKQKNYG FDDGQPCLIV 180
  181 KLNRIVNFMP RPPASNDSIP EAVRPKLQGN VIPIHCSSKR EEEANLLGQI KYFGVGNGFP 240
  241 LQYYPYYGKL LQPQYLQPLV AIKFYNITTD VDVRVECKVY GENIDYSEKD RSQGRFDIKF 300
  301 TIKTKS

Type	Start	End	Confidence
Cytoplasmic	1	33	0.92
Transmembrane Helix	34	56	0.90
Non-Cytoplasmic	57	306	0.96