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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11096277
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYGRSDSYR VATTQDNDDK ESPKKGKGGK DLDDLKKEVP LTEHKMSIEE VCRKYNTDIV  60
   61 QGLTNARAAE YLARDGPNAL TPPPTTPEWV KFCRQLFGGF SILLWIGAIL CFLAYAIQAA 120
  121 TEDEPAGDNL YLGIVLSAVV IITGCFSYFQ EAKSSKIMES FKNMVPQQAL VIREGEKLQI 180
  181 NAEEVAGGDL VEVKGGDRIP ADLRIISAHG CKVDNSSLTG ESEPQTRSPD CTHDNPLETR 240
  241 NIAFFSTNCV EGTARGIVVC TGDRTVMGRI ATLTSGLETG KTPIAKEIEH FIHIITGVAV 300
  301 FLGVTFFILS IILGYSWLEA VIFLIGIIVA NVPEGLLATV TVCLTLTAKR MARKNCLVKN 360
  361 LEAVETLGST STICSDKTGT LTQNRMTVAH MWFDNQIHEA DTTEDQSGAS FDKSSGTWLA 420
  421 LARVAALCNR AVFKAGQESL PILKRDVAGD ASESALLKCI ELSCGSVKAM RDKNKKVAEI 480
  481 PFNSTNKYQL SVHELDESEE NHYLLVMKGA PERILDRCST ILQQGKEQPM DEELKEAFQN 540
  541 AYLELGGLGE RVLGFCHLVM PGDKYPKGFA FDTDDINFQT DNLCFVGLMS MIDPPRAAVP 600
  601 DAVGKCRSAG IEVIMVTGDH PITAKAIAKG VGIISEGNET VEDIAARLNI PVSQVNPRDA 660
  661 KACVIHGTDL KDLSQDQMDE VLKNHTEIVF ARTSPQQKLI IVEGCQRQGA IVAVTGDGVN 720
  721 DSPALKKADI GVAMGISGSD VSKQAADMIL LDDNFASIVT GVEEGRLIFD NLKKSIAYTL 780
  781 TSNIPEITPF LFFILVNIPL PLGTITILCI DLGTDMVPAI SLAYEAAESD IMKRQPRNPL 840
  841 RDKLVNERLI SIAYGQIGMI QALGGFFSYF VILAENGFLP SVPVGIRLNW DDRSNNDLED 900
  901 SYGQQWTYEQ RKIVEFTCHT AFFVSIVVVQ WADVIICKTR RNSVFQQGMK NKILIFGLFE 960
  961 ETALAAFLSY CPGMDVALRM YPLKPSWWFC AFPYSFLIFV YDEIRKLILR RNPGGWVEKE1020
 1021 TYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle