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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149062382, gi...
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.26
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRDPEAASP GAPTRDVLLV SAIITVSLSV TIVLCGLCHW CQRKLGKRYK NSLETVGTPD  60
   61 SGRGRGEKKA INGTLLSGAK VATAAAGLAV EREGRLGEKP APVPPPGEDA LRSGGAAPSE 120
  121 PGSSGKAGRG RWRMVQSHLA AGKLNLSKEG RMVVLSLVLG LSEQDDFANI PDLQNPGTQQ 180
  181 NQNAQGDKRL PAGGKAVNTA PVPGQTPHDE SDRRTEPRSS VSDLVNSLTS EMLMLSPGSE 240
  241 EDEAHEGCSR ENLGRIQFSV GYNFQESTLT VKVMKAQELP AKDFSGTSDP FVKIYLLPDK 300
  301 KHKLETKVKR KNLNPHWNET FLFEGFPYEK VVQRILYLQV LDYDRFSRND PIGEVSIPLN 360
  361 KVDLTQMQTF WKDLKPCSDG SGSRGELLLS LCYNPSANSI IVNIIKARNL KAMDIGGTSD 420
  421 PYVKVWLMYK DKRVEKKKTV TKKRNLNPIF NESFAFDIPT EKLRETTIII TVMDKDKLSR 480
  481 NDVIGKIYLS WKSGPGEVKH WKDMIARPRQ PVAQWHQLKA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle