YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12024873
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNESSSVVG YLLLHLFVLC MQAKVTVQSP PNFTQHVREQ SLVTDQLSRR LIRTYQLYSR  60
   61 TSGKQVQVLG NKKINAMAED GDSHAKLIVE TDTFGSRVRI KGAETGYYIC MNKKGKLIGK 120
  121 SNGRGKDCVF SEIVLENNYT ALQNAKYEGW YMAFTREGRP RKGSKTRQHQ REVHFMKRLP 180
  181 KGHQTTEPHR RFEFVNYPFN RRSKRTRHSV PR

Type	Start	End	Confidence
Signal Peptide	1	23	0.63
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	212	0.98