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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2654118
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHINVNVLLS STSITTPSMN TSILAILFLI QCVFTLGLHF HPLDPLTPQE INKTSFIVKK  60
   61 SHLGNLKDLT FHYLDLEEPN KSHVLQWLSP NPSKKPPPPR RRSFVVVRAG GQTYELIIDL 120
  121 ITSKIASSRI YTGHGFPSFT FIELFKASKL PLTYPPFKKS ILDRSLNISE VSCIPFTVGW 180
  181 YGETTTRREL KASCFYRDGS VNVFTRPIEG ITITIDVDSM QVVKYSDRFR KPLPEKEGND 240
  241 FRKKHKPFPF SCNVSDTGFK ILGNRVKWAN WKFHVGFTAR AGVTISTASV LDPRTKRFRR 300
  301 VMYRGHVSET FVPYMDPTYE WYYRTFMDIG EFGFGRSAVN LQPLIDCPQN AAFFDGHVAG 360
  361 PDGTAQKMTN VMCVFEKNGY GASFRHTEIN VPGQVITSGA AEISLVVRMV ATLGNYDYIV 420
  421 DWEFKKSGAI RVGVDLTGVL EVKATSYTSN EQITENVYGT QVAKNTIAVN HDHYLTYYLD 480
  481 LDVDGNGNSL VKAKLKTVRV TDVNKTSSRR KSYWTVVKET AKTEADGRVR LGSEPVELLI 540
  541 VNPNKKTKIG NTVGYRLIPE HLPATSLLTD DDYPEIRAGY TKYPVWVTAY DRSERWAGGF 600
  601 YSDRSRGDDG LAVWSSRNRE IENKDIVMWY NVGFHHIPYQ EDFPVMPTLH GGFTLRPSNF 660
  661 FDNDPLIG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle