YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7431178, gi\|2...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAASATFT IGTTQTGRSL PQSSPFGLKF NSQVNFNTFS GLKAMPSLRC DSESSFSGKE  60
   61 TCAALRATFA PKAQKENRNL TRNLQPQASY KVAVLGAAGG IGQPLALLIK MSPLVSDLHL 120
  121 YDIANVKGVA ADISHCNTPS KVLDFTGASE LANCLKGVDV VVIPAGVPRK PGMTRDDLFN 180
  181 INAGIVRDLV TAVADNCPNA FIHIISNPVN STVPIAAEIL KQKGVYDPKK LFGVSTLDVV 240
  241 RANTFVAQKK NLRLIDVDVP VVGGHAGITI LPLLSKTKPS VSFTDEEIEE LTVRIQNAGT 300
  301 EVVEAKAGAG SATLSMAYAA ARFVESSLRA LDGDADVYEC SFVQSDLTDL PFFASRVKIG 360
  361 RKGVEALIPT DLQGLSEYEQ KALEALKPEL KASIEKGVAF AQKQTVTA

Type	Start	End	Confidence
Signal Peptide	1	16	0.49
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	408	0.97