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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14486705
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGPLDFFAR PCFEGFSGSD EKRERRSDFE NSEDERRTRI GSLKKKALSA STKFKHSLRK  60
   61 KSSRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLIMDEL LPQAFDDYHM MLRFLKARKF 120
  121 DIEKAKHMWA EMLQWRKEFG ADTIMQDFEF QELDEVVRYY PHGHHGVDKE GRPVYIERLG 180
  181 KVDPNKLMQV TTMDRYVRYH VQEFEKSFAI KFPACTIAAK RHIDSSTTIL DVQGVGLKNF 240
  241 TKSARELITR LQKVDGDNYP ETLCQMFIIN AGPGFRLLWN TVKSFLDPKT TSKIHVLGNK 300
  301 YHSKLLEVID ASELPEFLGG ACTCEDQGGC LRSDKGPWKN PEILKMVLNG EPRRARQVVK 360
  361 VLNSEGKVIA YAKPRYPTVK GSDTSTAESG SEAEDIASPK AMKNYSHLRL TPVREEAKIV 420
  421 GKSSYTNNFS GYDEYVPMVD KPVDAVLKKQ ASLQRSYTSQ GAPSRPATQR TPEGIQARIL 480
  481 VAITAFLLTI FTIFRQVACR VTKKLPAISS NHDQSTSEPT FDTTVVEVIP SSSTPAHTEE 540
  541 NLLPSMLKRL GELEEKVDTL QSKPSEMPYE KEELLNAAVC RVDALEAELI ATKKALYEAL 600
  601 MRQEELLAYI DRQAEAKLRK KRFCW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle