YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14484934
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKACVKRL QKEYRALCKE PVSHVVARPS PNDILEWHYV LEGSEGTPFA GGFYYGKIKF  60
   61 PPEYPFKPPG ISMTTPNGRF MTQKKICLSM SDFHPESWNP MWSVSSILTG LLSFMMDNSP 120
  121 TTGSVSTTVA EKKKLAKASL AFNCKNPTFR KLFPEYVEKY EQQQLSSQPV PEQVSSMPAG 180
  181 ADKSRPLLEE HDNSPKDEVN RVKPLKDVKN QQRKSVPTWL LLLLVSIFGV VMALPLLQL

Type	Start	End	Confidence
Cytoplasmic	1	215	0.82
Transmembrane Helix	216	237	0.91
Non-Cytoplasmic	238	239	0.76