YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3559811
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNLRKLNLL SVSLTIIFVS LTIATNLPFF EVKYPNNNPF GMLLRPTPIK NQSLGLPAHV  60
   61 GSDECRVWTK ACSDEILRLT YQPDNVAWLK RVRRTIHENP ELAFEEYETS RLVRSELDRM 120
  121 GIMYRYPLAK TGIRAWIGSG GPPFVAVRAD MDALPIQEAV EWEHISKVAG KMHACGHDAH 180
  181 VTMLLGAAHI LKAREHLLKG TVVLLFQPAE EAGNGAKNMI EDGALDDVEA IFAVHVSHIH 240
  241 PTGVIGSRSG PLLAGCGIFR AVITSEDSRG AANLLLAASS AVISLQGIVS REASPLDSQV 300
  301 VSVTSFDGGH SLDVAPDTVV LGGTFRAFSN SSFYYLKKRI QEVLMDQVGV FGCQATVNFF 360
  361 EKQNAIYPPT TNNDATYNHL KKVTIDLLGD SHFTLAPQMM GAEDFAFYSE IIPAAFYFIG 420
  421 IRNEELGSVH IAHSPHFMID EDSLPVGAAV HAAVAERYLN DKHS

Type	Start	End	Confidence
Signal Peptide	1	24	0.68
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	464	0.98