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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2854044
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENESVKSEH SGRSRRSRNH NNNGGGGGGG GGGVSGGGGS VNNGYHRERD RSRHSHRSTH  60
   61 SSKSAKGFQR GDMAPYQTSV NMTGDGSHDG QEVIEVQILP QDENWGENTT AVTGNTSEQS 120
  121 ISMEDINNMW HRESDKGFSF ACRRYVESSF YFLLGCGAFF SPVAMVVMPY VGFFPSAFDH 180
  181 PEITQTVRTQ LLACSEQCKG QLVSLAARLL LLAIGLWAVF MRRTSATMPR IFLYRALVLL 240
  241 LVTICTFAYW LFYIVQVTNG AKIVVETGGD AVDYKSLVGY ATNFVDTLLF IHYVAVVLLE 300
  301 LRHQQPCYYI KIIRSPDGVS RSYMLGQLSI QRAAVWVLQH YYVDFPIFNP YLERIPISVS 360
  361 KSQRNKISNS FKYYEVDGVS NSQQQSQSRA VLAANARRRD SSHNERFYEE HEYERRVKKR 420
  421 RARLITAAEE AFTHIKRIHN EPAPALPLDP QEAASAVFPS MARALQKYLR VTRQQPRHTF 480
  481 ESILKHLAHC LKHDLSPRAF LEPYLTESPV MQSEKERRWV QSWSLICDEI VSRPIGNECT 540
  541 FQLIQNDVSL MVTVHKLPHF NLAEEVVDPK SNKFVLKLNS ETSV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle