YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4574746
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNVTLVLAM ILFLSCVTSK VTATELESST NQELFLSRHL PRFHPKQHWP FRGSGKAFPA  60
   61 GHFRLTPFHL PQEVTRCLND KKEVGTCFND IAETFFTRKA AIGSECCAAI KKMNKDCEKT 120
  121 VFGSFHDPFL TGYVKLHCST VVGSTSPPPS QAPLHAPSSQ APSHAPSHAP SQAPLNAPLN 180
  181 APLHAPLHAP SQAPSQAPSQ APLHAPLLPP SQAPSPAQ

Type	Start	End	Confidence
Signal Peptide	1	23	0.95
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	218	0.99