YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2055454
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGAQKLLGR LGQIGVALAV TGGVVQSALY NVDGGQRAVI FDRFTGVKPD VVGEGTHFLI  60
   61 PWVQRPIIFD IRSTPRAIST ITGSKDLQNV SITLRILHRP EPSKLPNIYL NIGQDYAERV 120
  121 LPSITNEVLK AVVAQFDAHE MITQRESVSH RVSVELSERA RQFGILLDDI AITHLSFGRE 180
  181 FTEAVEMKQV AQQEAEKARY LVETAEQMKI AAITTAEGDA QAAKLLAQAF KDAGDGLIEL 240
  241 RKIEAAEEIA ERMSKTRNVI YLPGNQNTLF NLPA

Type	Start	End	Confidence
Signal Peptide	1	27	0.90
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	274	0.99