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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|5733089
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESRNLLRFL VLSVCVALVL LLTLFHSPTS LSNKGVLDCN LYSGWCSSKN RFSSSTKPKV  60
   61 IKKQPSFTYQ NNHESEVPQH PLDPLTIQEF NKVRNILSTH PLFKSPSSYI LHSIVLDEPD 120
  121 KKLVLKWKKG DPLLPRKASV IARVNRVAYV LTVDLSTGEV TGGERDLGSV SGYPTMTLEE 180
  181 MVGVLEVPLK SPEFNKTISK RGVNLADLTC IPVASGWYGT QVEEENGRLI KVQCYSHKGT 240
  241 VNFYMKPIEG VNALVDMDRK KVLAILDNGQ NIPVSSGINT DYRYSIQKLN GELSLFNPIS 300
  301 LEQPKGPSFT VDGHLVKWAN WEFHVKPDPR AGTIISQVKV RDPDTSKLRN VMYKGFTSEL 360
  361 FVPYMDPTEG WYFKTYMDAG EYGFGLQAMP LDPLNDCPRN AYYMDGVFAS ADGTPYLQPN 420
  421 MICVFESYAG DVAWRHAECP ITNMKVTEAR PKVTLVVRMA AAVANYDYIV DWEFQTDGLI 480
  481 RSKVGLSGIL MVKGSSYENM NQVPEQEDLY GTLLSENSIG VIHDHFLTYY LDIDIDGSQN 540
  541 SFVKVNLKKQ ETSPGESPRK SYLKAVRKVA KTEKDAQIRL KLYDPCEFHL VNPLKKTKVG 600
  601 NPVGYKIVPG GTAASLLDAE DPPQKRAAFT NNQIWVTPYN KTEQWAGGLF VYQSKGDDTL 660
  661 QVWSNRNRPI ENKDIVLWYT LGFHHIPCQE DYPIMPTVSS SFDLKPVNFF ERNPILRVPP 720
  721 NFEDDLPVCK AHGSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle