YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|5714392
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSMELVKSI ALASLLTFIW LLTGAHGYGG WESAHATFYG GSDASGTMGG ACGYGNLYSQ  60
   61 GYGTNTAALS TALFNDGLSC GACYEMRCND DPQWCLPGTV TVTATNFCPP NNALPNDNGG 120
  121 WCNPPLQHFD MAEPAFLKIA KYRGGIVPIL YTRVPCLRKG GIRFTVNGHS YFNLVLITNV 180
  181 GGAGDVHAVS IKGSRSGWQP MSRNWGQNWQ SNSYLNGQSL SFQVTTSDGR TVVSNNVAPS 240
  241 NWQFGQTFEG SQV

Type	Start	End	Confidence
Signal Peptide	1	27	0.99
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	253	0.99