YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14290161, gi\|...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.66
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFELSLPFL GLLLCVGGTA AQDVADEELT ASPEELQVEI SGTTVKVRCS LSETVQWKPY  60
   61 SPDTEDTTFI KTNHDSSPLN LTCTADNKNI HMYLKARVCT NCMELDTLTV TGIIIADLLI 120
  121 TFGLLILVYY FSKDKKGRPS AGAGSRPRGQ KTQRPPPVPN PDYEPIRKGQ REVYAGLESR 180
  181 GY

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	112	0.98
Transmembrane Helix	113	131	0.64
Cytoplasmic	132	182	0.65