YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|5656618
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLTLRVQGA RHWLKSTRCL ASSAAPAKSP SSPPQLEVSG STYATDGWTN VTPKILSYVG  60
   61 ANKHLQTDHP LSIIRQRIVN YFYGAYRNQR GNPLFSVYDQ MNPVVTVQQN FDNLLIPADH 120
  121 VSRQKSDCYY INQQHLLRAH TTAHQVELIS GGLDNFLVVG EVYRRDEIDS THYPVFHQAD 180
  181 AVRLVTKDKL FERNPGLELF EETWSGTLAD PKLILPHPSS WTKPNSPATR RAVKLMEHEM 240
  241 KHVLVGLTKD LFGPRIKYRW VDTYFPFTQP SWELEIYFKD NWLEVLGCGI MRHEILQRSG 300
  301 VHQSIGYAFG VGLERLAMVL FDIPDIRLFW SNDSGFLSQF SEKDLHNLPK YKPISHYPQC 360
  361 TNDLSFWLPQ DIEVDAGFSP NDFYDLVRSV AGDMVEQISL VDKFKHPKTG KSSVCFRIVY 420
  421 RHMERTLTQA EVNEIHKQIA SASVDSFNVQ IR

Type	Start	End	Confidence
Signal Peptide	1	31	0.54
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	452	0.99