YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TATA_PEA
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEITLSISSS SVIPTRLPNS SCYSNLSFLS SNSNTSSLLL KKARIKTRTT KGFTCNAFFG  60
   61 LGVPELVVIA GVAALVFGPK KLPEVGRSIG QTVKSFQQAA KEFETELKKE PNPTEEISVA 120
  121 SEQEKQEIKV SSTKDNV

Type	Start	End	Confidence
Cytoplasmic	1	52	0.74
Transmembrane Helix	53	77	0.75
Non-Cytoplasmic	78	137	0.92