YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3551956
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMGYSCVVL GLILVSLPGA WPWSKEGHIV TCRIAQDLLE PEAAETVRNL LPHYVDGDLS  60
   61 ALCTWPDQIR HWYKYRWSSP LHFIDTPDDA CSFDYSRDCH DPKGAEDMCV AGAVHNYTTQ 120
  121 LMHYRDGTSD RRYNLTESLL FLSHFMGDIH QPMHVGFTSD EGGNTINLRW FRHKSNLHHV 180
  181 WDREIILTAL ADYYGKDLDA FQQDLQNNFT TGIWSDDTSS WGECDDLFSC PKKWASESIS 240
  241 LACKWGYKGV TPGETLSDEY FNSRMPIVMK RIAQGGVRLA MVLNRVFSDH KQHIPPPT

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	298	0.99