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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14251025, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWPRRRTKA ATTTPTTTVS ASTAEAAWLS DAATMFHIGR LVQASVLGGE ALAACVRDMM  60
   61 AQRVRLAHSS GLTVTISDAA SPRTCWRGLE QVGQRYPPIV GRLTVFGVAG PPAAPPPAAG 120
  121 SAAASWEAPC RQMIFLMTDA WDVVVWYNDL LFYVAPSMQE FWVSPIVLEY DNAVFPLSER 180
  181 SYVTQYAGQV DDLIQFYHRL VYEKQVLENR WNRSQEGRIC FAKEWNRLQY VLAHGSVVVR 240
  241 RGRLPPMFVD DETLFRHVTN EEYKRLLKQM ILCANCLPIR SHASTAPVSS RRQHGAGAAP 300
  301 VYMTVWSYPT PPPDAAGTTA GTTAGAVAPP PVVVTSPWVA GSPVVTVSPV ITASPVVGAA 360
  361 PVITASPVIG TGPVITTSPV LGTGPVITTS PVLGTGPVIT TSPVIGAGPV ITASPVVGAA 420
  421 PVLTASPLIG TPPLITTSPG SVVAPVLNAL PVTADSAAVL EPRPRPDPES ERAARDRARL 480
  481 ATVRISSPGF STDGTAGRPR DLP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle