YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|5457141
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVALIFLTV SILLIQVKNV KANYDWDSMQ DGPSEEIIPG CGGDTIYYPD PVQPCDTDSN  60
   61 PTTTKPRQTT KRPKSTRRTT KRTKRPHRKT TKRTTKRATK RTTKRTTRRR PTTPKTPDTT 120
  121 DSPITTTGAE CTCSDRTTAS STDSTTDTTT VTNTDWTTPL CTDTPPCTCS EESSTAIPSS 180
  181 PCIDTSTVIP TSPCTQETTT PTPTCSTQGT PTTPCTCALT TTTTKCTTTS STCSPSTTTP 240
  241 ISKTTTSTSR PTTTTPRS

Type	Start	End	Confidence
Signal Peptide	1	22	0.96
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	258	0.99