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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7434562, gi|2...
Protein type: Globular with Signal Peptide
Type Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFSAAVAQ FSRVSPSHTS LHSHSHGTLF QSQCRPFFLS RTSHSLRKGL TLPRGREAPS  60
   61 TSVRASFTDV SPNVSLEEKQ LPKGETWSVH KFGGTCVGTS QRIKNVADII LKDDSERKLV 120
  121 VVSAMSKVTD MMYDLIHKAQ SRDESYTAAL NAVLEKHSAT AHDILDGDNL ATFLSKLHHD 180
  181 ISNLKAMLRA IYIAGHATES FTDFVVGHGE LWSAQMLSLV IRKNGTDCKW MDTRDVLIVN 240
  241 PTGSNQVDPD YLESEQRLEK WYSLNPCKVI IATGFIASTP QNIPTTLKRD GSDFSAAIMG 300
  301 ALFKARQVTI WTDVDGVYSA DPRKVSEAVI LKTLSYQEAW EMSYFGANVL HPRTIIPVMR 360
  361 YGIPIMIRNI FNLSAPGTKI CHPSVNDHED SQNLQNFVKG FATIDNLALV NVEGTGMAGV 420
  421 PGTASAIFGA VKDVGANVIM ISQASSEHSV CFAVPEKEVK AVAEALQSRF RQALDNGRLS 480
  481 QVAVIPNCSI LAAVGQKMAS TPGVSASLFN ALAKANINVR AIAQGCSEYN ITVVVKREDC 540
  541 IKALRAVHSR FYLSRTTIAM GIIGPGLIGS TLLEQLRDQA STLKEEFNID LRVMGILGSK 600
  601 SMLLSDVGID LARWRELREE RGEVANMEKF VQHVHGNHFI PNTALVDCTA DSVIAGYYYD 660
  661 WLRKGIHVVT PNKKANSGPL DQYLKLRALQ RQSYTHYFYE ATVGAGLPIV STLRGLLETG 720
  721 DKILQIEGIF SGTLSYIFNN FKDGRAFSEV VSEAKEAGYT EPDPRDDLSG TDVARKVIIL 780
  781 ARESGLKLEL SNIPVESPVP EPLRACASAQ EFMQELPKFD QEFTKKQEDA ENAGEVLRYV 840
  841 GVVDVTNKKG VVELRRYKKD HPFAQLSGSD NIIAFTTRRY KDQPLIVRGP GAGAQVTAGG 900
  901 IFSDILRLAS YLGAPS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle