YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14210081
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNKKFKLNF IALTVAYALT PYTEAALVRD DVDYQIFRDF AENKGRFSVG ATNVEVRDKN  60
   61 NHSLGNALPN GIPMIDFSVV DVNKRIGTLV DPQYIVSVKH AHQYMNDFYF GHYNGHRDVS 120
  121 NDENKYSVVT QNNVNSSEKW DVNKRLDDYN MPRLNKFVTE VAPTTPTLAG DDLETYKDKE 180
  181 KYPSFVRVGA GRQLVYEKGS RHVEGNEHGE DLKDLSVAYN YAIGGTPYEG INIDPSQSKK 240
  241 GLIGFGDSRK DHVIDTKILL SQAPLTNYGV LGDSGSPLFA FDKQQNKWIF IGPYTYWAGY 300
  301 EKKSWQEWNI YKTTFADGIK NRDNAKPVPF SNKEYRWTNT TNHQSEIKNT DHTITVTLPS 360
  361 DPDRLVNYQK EENKNTGQNV IFEGNGNSKN TLVLENNINQ GAGGLFFKGN YEVKGTTDNI 420
  421 TWVGGGIDVA EGKTVTWKVH NPEKDHLAKI GKGKLIVEGK GDNKGSLKVG DGTVVLKQQT 480
  481 TTGQHAFASV GIVSGRSTVV LNDDKQVDPN SIYFGFRGGR LDLNGNSLTF DHIRNIDDGA 540
  541 RLVNHNMTNA SNITITGESL ITDPKKINPY YIKAREEDNP YAFRWIKDGE QLYFNLENYT 600
  601 YYALRKGGKA NSQLPYNDKE SNENWLYMGK NADEAKRNVM KHINNERMNG FNGYFGEEEG 660
  661 KDNGNLNVTF KGKTEQNRFL LTGGTNLNGN LKVEQGTLFL SGRPTPHARD IAGISSTKKD 720
  721 SHFAENNEVV VEDDWINRNF KATTMNVTGN ASLYSGRNVE SITSNITASS KAQVHIGYKK 780
  781 GDTVCVRSDY TGYVTCHNGD LSEKALNSFN ATNVFGNVNL SGNANFTLGK ANLHGSIQAG 840
  841 GNSQVHLTEN SHWYLTGDSN VHQLDLKNGH IHLNSADNKN NVTKYNTLNI SNLSGNGSFY 900
  901 YLTDLSKNQG DKVVVTKSAK GNFTLQVADK TGEPTKNELT LFDASNATRS NLVVTLANGS 960
  961 VDRGAWKYKL RENNGRYDLY NPEVERRHQT VDTPSVEMPN DMQADAPSAP SNNEEIARVD1020
 1021 APVPPPAPPA PATGSAMAKE QPKTRPAETA QPTMEETKAA NSTETAPKSD TTTQADTSNS1080
 1081 ESVPSETTET VAENSPQESA SVEKNAEEAT ETTPQNDEVA KEAKPTVETK DQTNEMTQSG1140
 1141 SENTTETQAE NKVSQPTETD KIATVETEET ARVEKEETQV ASQTFPKQEE PEMTKQQAEP1200
 1201 ETRNVPIVNN LEEAQPQTKP ITVATAETPT SNSKSAEKTQ PSGETNAEPV TPVVVSENQP1260
 1261 ENTISQPTED TVVKVETEET PKVETGGTKE APQVASQTSP KQEEPETVQP QAEPAQENSP1320
 1321 TVNNVEEAQP QTQPTIVAAK EITAPNSAQK ETAQSVANPK TAEQPVTVST ENPVVENPEN1380
 1381 TTQPAVNSEA VQPETATTGT VSQPKEASTD ETTVASTDET TGTSAEETTV ADNSEASKPK1440
 1441 RRSRRDVSST PHNVEPAVTG GGRDRSAVVV PLRDLTSTNT NAVLSDAMAK AQFVALNVGK1500
 1501 AVSQHISQLE MNNEGQYNVW VSNTSMNENY SSDQYRRFSS KSAQTQLGWD QTISNNVQLG1560
 1561 GILTYVRNSN SFDKASSKNT LAQANFYSKY YADNHWYLAV DLGYGNFQSN LQTNHNAKFD1620
 1621 RHTAQIGLTA GKAFNLGNVA VKPTVGVRYS YLSNADFALD QDRIKVNPIS VKTAFAQVDL1680
 1681 SYTYNLGEFA ITPILSARYD ANQGNGKINV SGYAFAYNVE NQQQYNAGLK LKYHNVKLSL1740
 1741 MGGLTKAKQA EKQKTAEVKL SFSF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle