YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4323056
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKWGVGLTL LLASTSVLAK DIQLLNVSYD PTRELYEQYN KAFAAHWKQE TGDNVVVRQS  60
   61 HGGSGKQATS VINGIEADVV TLALAYDVDA IAERGRIDKN WIKRLPDNSA PYTSTIVFLV 120
  121 RKGNPKQIKD WNDLIKPGVS VITPNPKSSG GARWNYLGAW GYALHHNNGD QAKAQEFVKA 180
  181 LYKNVEVLDS GARGATNTFV ERGIGDVLIA WENEALLATH ELGKDKFEIV TPSESILAEP 240
  241 TVSVVDKVVE KKDTKAVAEA YLKYLYSPEG QEIAAKNFYR PRDAAVAKKY EGEFPKLKLF 300
  301 TIDDVFGGWT KAQKEHFSNG GTFDQISQR

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	329	0.99