YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|5257216
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRPVWGCVV AVLGVLWFYS SGVQSQCWEH SQCRDLSSEA NILDCIQACK VDLSAESPLF  60
   61 PGNGHLQPTS EDIQNYIMSH FHWNTFGQRM SGTPGGSKRE SASTTLSILL EALSQPRDEV 120
  121 ERESEEEEGL QQHRRDDKRS YSMEHFRWGK PVGRKRRPVK VYPNGVEEES AESYPAEIRR 180
  181 DLSLKLDYPM GEELEEVFGG ENDLLNLQDK KDGSYKMNHF RWSGPPKDKR YGGFMKSWDE 240
  241 RSQKPLLTLF KNVMIKDGHE KKGQ

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	264	0.99