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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14193660
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKAVKRLFD IIASASGLIV LSPVFLILAY LIRKNLGSPV FFIQERPGKD GKPFKMVKFR  60
   61 SMRDALDSDG IPLPDSERLT PFGKKLRAAS LDELPELWNV LKGDMSLVGP RPLLMQYLPL 120
  121 YDNFQNRRHE MKPGITGWAQ VNGRNALSWD EKFACDVWYI DHYSFWLDMK ILFLTVRKVF 180
  181 IKEGISAEGE ATMPYFTGNQ TNEKNNILIL SAGRRVELVQ DFQTEAARFS DGISVFATDL 240
  241 NPRMSSACHV SDGSFEVPPI SADSYIDSIF NLAVRENIGL IIPTIDTELQ KLADERERFE 300
  301 AASVHIVVSD SDFIAQCRDK RKTATLFARY GIRSPEIYDR KKLVFPCFAK PYDGSRAIGA 360
  361 KRIDTPADLT PEVLADTKLM FCQFIDIENK FSEFTVDMYY DRQCRLKCAI PRKRLEVRSG 420
  421 EISKGVTCKN SLYQTLLEKM AVLQGARGCI TAQFFYNEET GEFYGVEINP RFGGGFPLTY 480
  481 AAGGNYPSRL MREYLGDEEI PFSDDWENNL IMLRYDAKVL VHEND

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle