YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|11762247
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIVRRDFVR NGPGSVKMVA EDSDDLWYAY NLIAVGDSVM AVTFRKVQRE IPGGGRDSER  60
   61 VKLKLEVQVE EVDYDKDGSV LRIRGKNILE NEHVKIGAFH TLELELKRPF VLRKEMWDSM 120
  121 ALDTLKQASD PAASADLAVV LMQEGLAQIF LVGRSVTSSR ARIETSIPRK HGPAIAGYES 180
  181 ALKKFFENVL QAFVKHVDFS VVRCAVVASP GFTKVFFLVT QRLSKFTWFI IFQIAAGPGL 240
  241 QISHTYMTQT V

Type	Start	End	Confidence
Cytoplasmic	1	225	0.50
Transmembrane Helix	226	245	0.67
Non-Cytoplasmic	246	251	0.71