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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4836215
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRDSSMGLL KKLSVITLIV FALSISFAET ELIIHYHRWD GNYDGWNLWI WWVEPISKEG  60
   61 AAYQFTEKDD FGVVAKVKFP ETLTKVGIIV RLGEWREKDV AMDRFITIKD GKAEVWLLQG 120
  121 IEQIYTTKPD TSPRVLFAQA RDQYTIEAYL TGQVDTTKVG AKVTVDGQPL KIARVEKANP 180
  181 TDISRTNHVK VVLAEPIKLE DVNKDVQVEI EGYKPARVIM MEILDKIYYD GPLGFEYTPE 240
  241 KTTIRVWSPV SKTVDVLLYK NWDDKEPTQV VPMKYIGNGA WEAVLEGNWD GWFYKIRYFS 300
  301 YGEYRESVDY FSKAVTKNSA KSAIIDFSKT NPESWEKVAR PPLVAPEDAI IYEIHIADMT 360
  361 GLDNSGVKNK ALYLGLTEKG TRGPNGVTTG LDHLVELGVT HVHILPMFDF WTGDEADKDF 420
  421 ERSYNWGYDP YLFTVPEGRY STDPINPYTR IIEVKQMVKA LHENGIRVIL DMVFPHTWGV 480
  481 GVMSPFDQAV PYYFYRIDKT GAYLNESGCG NVIASERPMM RKYIVDTLKW WVTEYKIDGF 540
  541 RFDQMGLMDK VTMLAIKSEL SKIEPSVVLY GEPWGGWGAP IRFGKADVGG TGIAAFNDEF 600
  601 RDALRGSVFN ATVKGFLMGA LAKETGVKRG VAGSIEYDEV IRSFAKDPQE TINYVEVHDN 660
  661 HTLWDKNYLA AQADTTVKWT EEMLKDAQKL AGAILLTSQG IPFLHAGQDF ARTKKFDENS 720
  721 YKSPISINGL DYARKAEFID VFNYYKGLIE LRKSHIAFRQ RTAEDIRKKL TFLPSPRKMV 780
  781 AFVLKDEKDP WKEILVIYNG DTKDQQFTLP DGTWNVVVDK DNAGTKVLYQ VSGKINIKAI 840
  841 SAMVMYKGN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle