YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14190409
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSRAFTLF AFTLSLLTVA STVSGHNITQ ILSDTPEYSS FNNYLSQTKL ADEINSRTTI  60
   61 TVLVLNNGAM SSLAGKHPLS VVKNALSLLV LLDYYDPLKL HQLSKGTTLT TTLYQTTGHA 120
  121 LGNLGFVNVT DLKGGKVGFG SAAPGSKLDS SYTKSVKQIP YNISVLEINA PIIAPGILTA 180
  181 PAPSSAGVSN ITGLLEKAGC KTFANLLVSS GVIKTFESTV EKGLTVFAPS DEAFKARGVP 240
  241 DLTNLTQAEV VSLLEYHALA EYKPKGSLKT NKDAISTLAT NGAGKYDLTT STSGDEVILH 300
  301 TGVGPSRLAD TVVDETPVVI FTVDNVLLPA ELFGKSSSPA PAPEPVSAPT PTPAKSPSPV 360
  361 EAPSPTAASP PAPPVDESSP EGAPSDSPTS SENSNAKNAA FHVNAPALFT

Type	Start	End	Confidence
Signal Peptide	1	25	0.98
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	410	0.99