YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DCD3A_DICDI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYIENQGAY GTPTASIDWC ELNYTYSPYI AEFYNTFSSL IISLFGIYGI WIMMPNFGTG  60
   61 VEKEHIKILK QLDVRNKVIL SYISLIVVGV GSAFYHATLL YQNQLFDELP MIYTALIMLY 120
  121 IMVTVGEEKT KKGFKGGVLG NSLLRHLLPY LLIAYGLFVT ITILVIQDQP KILQVSFGAL 180
  181 VFYVVFHSIY LINKKKPDGM PSNPDSYLYK YAFVSMLVGF TCWVVERYFC KNGKTFGFQL 240
  241 HAFWHFFTGM STYVWTQFLI CKLLEAKHYC VGIKHTLGLP RIHAIKRF

Type	Start	End	Confidence
Non-Cytoplasmic	1	35	0.95
Transmembrane Helix	36	58	0.88
Cytoplasmic	59	77	0.94
Transmembrane Helix	78	99	0.94
Non-Cytoplasmic	100	108	0.81
Transmembrane Helix	109	126	0.95
Cytoplasmic	127	145	0.93
Transmembrane Helix	146	166	0.94
Non-Cytoplasmic	167	171	0.90
Transmembrane Helix	172	192	0.92
Cytoplasmic	193	206	0.94
Transmembrane Helix	207	227	0.89
Non-Cytoplasmic	228	240	0.79
Transmembrane Helix	241	261	0.85
Cytoplasmic	262	288	0.92