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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14165178
Protein type: Globular with Signal Peptide
Type Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKAAILILS VTSAVWSGVP LERQNLPSTP RQEVPVSGYR LPNNTIPLRY NVELTTHVHD  60
   61 HQSPNQFDFN GKVTIWLRVL EENVQNITLH YRQITVTHVK LTDATNTVLV NDDSSFTTDV 120
  121 TYEFLVILAP SILRIGDYSL ELEYHGKLRT DNGGFYRSSY TDARGNTRWI ATTQFESTDA 180
  181 RHAFPCYDEP GTRAPIGLKL THGNAYHAIS NMPIKSSLPW NATYTVTEFE DTLAMQTYLL 240
  241 AFVVSDFAFI SNTENKQSVY ANPVSISNGD LNFALEAGVK VINALEDYLQ VKYSFPKLDQ 300
  301 IGIPDFAAGA MENWGLVTYR EEVLIYNSTK SPMGQLKRTA SIIAHEYGHQ FFGNLVSPKW 360
  361 WSYLWLNEGF ATLMQYIAAD KAYPDLRIQD MATVEALQNA FQSDALENTR PMNSYVETPT 420
  421 AISALFDDIA YDKSGSVLRQ LQHAFGDTVF RAGLKYYLDA MQFQPATPAD LAAALQRAVD 480
  481 DHQALPSTVN VSDIINSWAD QSGYPVLHVR RNTDNVITVS QERYLLKRSK DAVKGTWYLP 540
  541 YNMATSQASD FSSTLPHDWL IDQTVELRPS AALNWTIDDW VIFNKQQTGY YRVNYDDKLW 600
  601 ELITHELHHG NHSSIHHLNR AQLIDDSLNL ARSGHLKYDI TLKLIQYLTK EEEYVPWASL 660
  661 NNGLAYLNRM LAGSSKYNLF KKYVWELVEP SFHKFGLENK PSDTHFAKLT RNILINWACQ 720
  721 VGSEDCLTQT NSQLAEVVSN KTKDIDPNLK GVVYCNGLRN ADRNTFQYVL DRMHRSQDPS 780
  781 DRMLLISALG CSENTALLEM YLATSLDETG DFGYRGQERS RVFSAVYVNG RVGLETAMKF 840
  841 LDANAATIDR LYNGGSFGGR AIGSAVTGMA RRVVNKEQYD DFLAMNTRLE SAGYLNAGEL 900
  901 STAKELSGEN VQWTNTYFNV IESWLEANVK SGAVRFGTAS MMTVTTVAAL VAVLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle