YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4809220
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FGVASSRTSN GNVICSACAP GTFSDTTSST DVCRPHRICS ILAIPGNAST DAVCASESPT  60
   61 PSAGPRTIYV SQPEPTRSQP MGQEPGPSQT PHIPVSLGST PIIEPSITGG ISLPIGLIVG 120
  121 LTTLGLLMLG LATCFILVQR KKKPSCLQRE TMVPHLPDDK SQDAIGLEQQ HLLTT

Type	Start	End	Confidence
Non-Cytoplasmic	1	114	0.72
Transmembrane Helix	115	138	0.89
Cytoplasmic	139	175	0.84