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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25458468
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPALTRSTAF RWVGGGAVVV PALTRRAAFR WVGGVAVVVP ASAWIGHSEK LSDTHGSDKE  60
   61 DEVVDSSDDD CDPYFNYLVD SFMTATKAQP KQLYGNIDLV AAAQRQSNEY ASSALDYYNK 120
  121 DENNKIQYSL IKALKSSTIR EKGEKYGHVN FIASLDSKEE LFFAEVCWDP KNYDMVPTCI 180
  181 VSLEEKRRIG GRSFINDEYV VCLDLQNPPI DGKHCYGCSE EIKHPEDGST FKAGHKLPEL 240
  241 TLVKNLSLSG FLGGGLVSLL VSPGVIGGAG EIQGGGFPAM VKDTAYYDTL GVSVDASPAE 300
  301 IKKAYYLKAK QVHPDKNPGN PDAAQKFQEL GEAYQVLSDP SKREAYDKHG KEGLPHWRLT 360
  361 HFTRHFRDNM VDPAAVFGML FGSDYFEDYV GQLALASIAS VEVEENLNGQ EARGKVQEKI 420
  421 KELQKEREQK LIQSLKDRLQ PFVDERKDEF VNWANGEAQR LSHAAFGEAM LTTIGYIYVR 480
  481 QAARELGKSA IALMQLQEGM KKMEESDNKE DQIMKSFEEK KDAMLSYLWK INVVDIESTL 540
  541 THVCQAVLKD ASVPKDVLKL RARALKKLGT IFQLDDLVCD DAAMAPGSVI HLATRPRTSF 600
  601 VTIIAFDIVS WYVRVGPSAE RDLYFAKRIP REANAAMEPL IINEAMNGNG RMNVIN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle