YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45862012
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAFWKHLDH LESYICRALL AVFVTLLFVQ IVARQIFGFS ITWIEELSVI LFVWFAYFGA  60
   61 SYAARMAAHN RVTFHLNMMP RKAARVLEAI GDLFWIIFNV VFIWQAIQFI SRLKPFVKAQ 120
  121 TLGWEMRYVY MALPIAFALM TIRILQVNYL KLVKGIDPRD PDKVEVEEML ELAADEQRAY 180
  181 EREHKK

Type	Start	End	Confidence
Cytoplasmic	1	13	0.96
Transmembrane Helix	14	33	0.93
Non-Cytoplasmic	34	46	0.69
Transmembrane Helix	47	68	0.86
Cytoplasmic	69	85	0.93
Transmembrane Helix	86	107	0.90
Non-Cytoplasmic	108	127	0.89
Transmembrane Helix	128	147	0.89
Cytoplasmic	148	186	0.94