YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|126352659, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASQLRFDGR VVLVTGAGGG LGRAYALAFG ERGASVVVND LGGDMKGVGK SSLAADKVVE  60
   61 EIRSRGGKAV ASYDSVEAGE KIVKTALDAF GRIDVVVNNA GILRDRSFGR LSDEDWDIIH 120
  121 RVHLRGSFLV TRAAWDHMKK QKFGRIIMTS SASGIYGNFG QANYSAAKLG LLGLSNTLAI 180
  181 EGKKNNIHCN TIAPQAGSRL TQTVFPEDVV EALKPDYVAP LVLWLCHESC EENGSLFEVG 240
  241 AGWIGKLRWE RTLGALVRQR NQPMTPEAVK ANWKKICDFG SVSNPQTIQE STGGIIGLVS 300
  301 KMDSNGGVST NHTSHAASTA TSGFVGAIGQ KLPSFSSTYT ELEAIMYALG VGASIKEPKD 360
  361 MKFIYEGSSD FSCLPTFGVI TAQKSMLGEL AQIPGLSLDF AKVLHGEQYL ELYKPLPRTG 420
  421 KLKCEGVVAD ILDKGSGVVI LLDVYSYSGN ELLCYNQFSL FLVGSGGFGG KRTSDKMKVA 480
  481 VAVPNRPPDA ILTDTTSLNQ AALYRLSGDW NPLHIDPNFS SLAGFDKPIL HGLCTFGFSA 540
  541 RHVLQQFADH DVSRFKAIKA RFAKPVYPGQ TLQTEMWKEG NRIHFQTKIQ ETGDIVISNA 600
  601 YVDLVPTSDM LAKTPSKGGE LQSTLVFEEI GRRLKDIGHQ VVKTVNAVFE WHITEGGNTA 660
  661 ATWTIDLKNG SGEVYQGPAR GSADTTLTLS DEHFMEVVQG KLDPQKAFFS GKLKAKGNIM 720
  721 VSQKLQKILK DYAKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle