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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|485747, gi|21...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.90
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRILPSPGMP ALLSLVSLLS VLLMGCVAES PPVFIKKPVD QIGVSGGVAS FVCQATGDPK  60
   61 PRVTWNKKGK KVNSQRFETI EFDESAGAVL RIQPLRTPRD ENIYECVAQN PHGEVTVHAK 120
  121 LTVLREDQLP PGFPNIDMGP QLKVVERTRT ATMLCAASGN PDPEITWFKD FLPVDPSTSN 180
  181 GRIKQLRSGG LQIESSEETD QGKYECVASN SAGVRYSSPA NLYVRVRRVA PRFSILPVSH 240
  241 EIMPGGNVNI TCVAVGSPMP YVKWMQGAED LTPEDDMPVG RNVLELTDVK DSANYTCVAM 300
  301 SSLGVIEAVA QITVKSLPKA PGTPVVTETT ATSITITWDS GNPDPVSYYV IEYKSKSQDG 360
  361 PYQIKEDITT TRYSIGGLSP NSEYEIWVSA VNSIGQGPPS ESVVTRTGEQ APASAPRNVQ 420
  421 GRMLSSTTMI IQWEEPVEPN GQIRGYRVYY TMEPDQPVSN WQKHNVDDSL LTTVGSLLED 480
  481 ETYTVRVLAF TSVGDGPLSD PIQVKTQQGV PGQPMNFRAE AKTETSIVLS WSPPRQEIIV 540
  541 KYELLFKEGD HGREVPRNFE PTTSFTVEGL KPNTEYVFRL AARSALGLGA FTPEVRERTL 600
  601 QSILPKNFKV KMVTKTSVLL SWEFPENYNS PTPYKIQYNG LNVDVDGRTT KKLITNLKPH 660
  661 TFYNFVLMNR GNSMGGLQQN VAAWTAANML SRKPEVTHKP DADGNVVVIL PDVKSSVAVQ 720
  721 AYYIVVVPLR KSRGGQFLNP LGSPEEMDLE ELIQDIARLR RRSLRHSRQL DFPKPYIAAR 780
  781 FRSLPNHFVL GDMKHYDNFE NRALEPGQRY VIFILAVLQE PEATFAASPF SDPIQLDNPD 840
  841 PQPIIDGEEG LIWVIGPVLA VVFIICIVIA ILLYKNKPDS KRKDSEPRTK CLLNNAEITP 900
  901 HHPKDPVEMR RINFQTPGML SHPPIPVSEL AEHTEHLKAN DNLKLSQEYE SIDPGQQFTW 960
  961 EHSNLEVNKP KNRYANVIAY DHSRVILLPI EGIVGSDYIN ANYIDGYRKQ NAYIATQGPL1020
 1021 PETFGDFWRM VWEQRSATIV MMTKLEEKSR IKCDQYWPGR GTDTYGMIQV TLLDTIELAT1080
 1081 FCVRTFSLHK NGSSEKREVR QFQFTAWPDH GVPEYPTPFL AFLRRVKTCN PPDAGPIVVH1140
 1141 CSAGVGRTGC FIVIDAMLER IKHEKTVDIY GHVTLMRSQR NYMVQTEDQY SFIHDALLEA1200
 1201 VACGNTEVPA RNLYTYIQKL AQIEVGEHVT GMELEFKRLA NSKAHTSRFI SANLPCNKFK1260
 1261 NRLVNIMPYE TTRVCLQPIR GVEGSDYINA SFIDGYRQQK AYIATQGPLA ETTEDFWRML1320
 1321 WENNSTIVVM LTKLREMGRE KCHQYWPAER SARYQYFVVD PMAEYNMPQY ILREFKVTDA1380
 1381 RDGQSRTVRQ FQFTDWPEQG VPKSGEGFID FIGQVHKTKE QFGQDGPISV HCSAGVGRTG1440
 1441 VFITLSIVLE RMRYEGVVDI FQTVKMLRTQ PAMVQTEDEY QFCYQAALEY LGSFDHYAT

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