YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4096856
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTILFVTMVI SYFSCMRAAP MREIPGVQGG HRAEGYLGAA AAAAAAVTSG SRGHGTPQSG  60
   61 GGLPSLTDTF EQVIEELLEV EGEATQQLGP GADQGQGGGG PIDAADSKDV DLYASRVMIS 120
  121 NQVPLEPPLL FLLEEYKNYL DAANMSMRVR RHSDPARWGE LSVCDSISQW VTAVDKKTAI 180
  181 DMSGQTVTVL EKVPVTNGQL KQYFYETKCN PLGYTKEGCR GIDKRHYNSQ CRTTQSYVRA 240
  241 LTMDSKRKIG WRFIRIDTSC VCTLTIKRGR

Type	Start	End	Confidence
Signal Peptide	1	18	0.62
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	270	0.99