YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42795462
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSSKLVL VMCFMISAFG IAIGAKFDQE FDITWGDGRA KILNNGDLLT LSLDKISGSG  60
   61 FQSKNEYLFG KIDMQLKLVP GNSAGTVTAY YLSSQGPTHD EIDFEFLGNL SGDPYTLHTN 120
  121 VFSQGKGNRE QQFHLWFDPT ADFHTYSITW NPQRIIFYVD GTPIREYKNS ESIGVSYPKN 180
  181 QPMRIYSSLW NADDWATRGG LVKTDWSQAP FSASYRNFSA NACIPTSSSS CSSNSAASTS 240
  241 NSWLNEELDN TSQERLKWVQ KNYMVYDYCT DSKRFPQGFP ADCVQNI

Type	Start	End	Confidence
Signal Peptide	1	24	0.96
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	287	0.99