YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4204716
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCIGFLAMWK SNRSTVSGYF LAGRSMTWVA IGASLFVSNI GSEHFIGLAG SGAASGFAVG  60
   61 AWEFNALLLL QLLGWVFIPI YIRSGVYTMP EYLSKRFGGH RIQVYFAALS LLLYIFTKLS 120
  121 VDLYSGALFI QESLGWNLYV SVILLIGMTA LLTVTGGLVA VIYTDTLQAL LMIIGALTLM 180
  181 VISMMKVGG

Type	Start	End	Confidence
Cytoplasmic	1	19	0.87
Transmembrane Helix	20	40	0.89
Non-Cytoplasmic	41	60	0.70
Transmembrane Helix	61	82	0.84
Cytoplasmic	83	101	0.72
Transmembrane Helix	102	121	0.87
Non-Cytoplasmic	122	137	0.76
Transmembrane Helix	138	161	0.88
Cytoplasmic	162	166	0.67
Transmembrane Helix	167	187	0.89
Non-Cytoplasmic	188	189	0.71