YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0292040, FBp...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITRLYNTEE DPAYCSFIWG SNLTSSVDVL AANATSVFSS DLRDDFYRDV EDPRTESLRE  60
   61 YCYGLVLPII CAMGIIGNVL NLVVLTRRNM RGTAYIYMRA YSTAALLAIV FAIPFGIRML 120
  121 VHKDRGQWEE FGPAFYTAHL ELYLGNGCLG VGVMMLLVLT IERYVSVCHP GFARPVMGPP 180
  181 GVVVFLTCLA TVIVYLPSIF RGELIKCILG SSDVYVYLRR DNTIYQQTIF YRVYKIMLEV 240
  241 IFKLVPTLVI GGLNMRIMMV YRRTCERRRK MVLSRPHAQG HGHGHGHGHG HGHGHAHGHG 300
  301 YLKDDDPRKF AEERRLFLLL GSTSILFLVC VSPMAILHMT IASEVYPSFP FQVFRASANL 360
  361 LELINYSLTF YIYCLFSEDF RNTLVRTIKW PWLKGKFCHQ AEHEVSASPP ATAGTVAVAG 420
  421 TGNGHVSIFH PAIPALTLTP AEPDERPRCA NGVLH

Type	Start	End	Confidence
Non-Cytoplasmic	1	62	0.65
Transmembrane Helix	63	85	0.89
Cytoplasmic	86	96	0.83
Transmembrane Helix	97	121	0.84
Non-Cytoplasmic	122	141	0.82
Transmembrane Helix	142	161	0.95
Cytoplasmic	162	175	0.78
Transmembrane Helix	176	196	0.89
Non-Cytoplasmic	197	239	0.87
Transmembrane Helix	240	260	0.87
Cytoplasmic	261	316	0.98
Transmembrane Helix	317	341	0.90
Non-Cytoplasmic	342	357	0.88
Transmembrane Helix	358	376	0.57
Cytoplasmic	377	455	0.60