YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4416230
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKSIRFFIV SILLSPFASA QVKDFVIEPP IKNNLHIYKT FGVFGGKEYS ANSMYLVTKK  60
   61 GVVLFDVPWE KIQYQSLMDT IKKRHNLPVV AVFATHSHDD RAGDLSFFNN KGIKTYATAK 120
  121 TNEFLKKDGK ATSTEIIKTG KPYRIGGEEF VVDFLGEGHT ADNVVVWFPK YNVLDGGCLV 180
  181 KSNSATDLGY IKEANVEQWP KTINKLKAKY SKATLIIPGH DEWKGGGHVE HTLELLNKK

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	239	0.99