YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4204389
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVAMVSADS SGCNSHMPYG YAVQARARER ERLAQSRAAA AAAVAAATAA VEGGATGGGG  60
   61 PYHHYHQEQG RGASSSHGGN ASRSSLPNRQ SGKRWKKGKK RSHHLGSREC GASFPCSELL 120
  121 PLSGSEERIL KDVSEEEEED EDEDEDDEEE GKLYYSADYG EDEFSYSDQP PDDGGGPGGY 180
  181 SSVRYSEYEC CERVVINVSG LRFETQLKTL AQFPETLLGD PAKRGRYFDP LRNEYFFDRN 240
  241 RPSFDAILYY YQSGGRLKRP VNVPFDIFSE EVKFYQLGEE AMLKFREDEG FVKEEEDKAL 300
  301 PENEFKRQVW LLFEYPESSS PARGIAIVSV LVILISIVIF CLETLPEFRD DKEFIMSLSS 360
  361 GKGISNESLH LDDGEHTIFN DPFFIVETVC IIWFSFEFTV RCFACPSKAH FLKNIMNIID 420
  421 IVSILPYFIT LGTDLVQEQG SNGQQAMSFA ILRIIRLVRV FRIFKLSRHS KGLQILGHTL 480
  481 RASMRELGLL IFFLFIGVIL FSSAVYFAEA DEPATHFQSI PDAFWWAVVT MTTVGYGDMK 540
  541 PITVGGKIVG SLCAIAGVLT IALPVPVIVS NFNYFYHRET ENEEQTQLMQ NAVSCPYLPT 600
  601 NLLKKFRSSS SSSTEDKSEY LEMEEGVKES LCVKEKKSQD TGNSSESEKK NCVNSNSVET 660
  661 DV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle