YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ADT_DICDI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.32
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNQKKNDVS SFVKDSLIGG TAGGVSKTIV APIERVKLLL QVQSASTQIA ADKQYKGIVD  60
   61 CFVRVSKEQG VISLWRGNLA NVIRYFPTQA LNFAFKDKYK KFFVRHTAKE NPTKFFIGNL 120
  121 LSGGAAGATS LLFVYPLDFA RTRLAADVGT GSARQFTGLG NCISSIYKRD GLIGLYRGFG 180
  181 VSVGGIFVYR AAFFGGYDTA KGILLGENNK KASFWASWGI AQVVTTIAGV VSYPFDTVRR 240
  241 RMMMQAGRAD ILYSSTWDCW VKIATREGPT AFFKGALSNA IRGSGGALVL VIYDEIQKLM 300
  301 GFEGGVGSE

Type	Start	End	Confidence
Cytoplasmic	1	114	0.75
Transmembrane Helix	115	137	0.65
Non-Cytoplasmic	138	143	0.42
Transmembrane Helix	144	158	0.32
Cytoplasmic	159	172	0.71
Transmembrane Helix	173	193	0.91
Non-Cytoplasmic	194	213	0.85
Transmembrane Helix	214	235	0.93
Cytoplasmic	236	309	0.83